三维图像切面提取
切片(Slice)或切面是三维图像比较常用的概念,尤其在医学图像中。通过提取切面可以方便地浏览和分析图像内部组织结构。VTK中vtkImageReSlice类可以实现图像切面的提取。在实际开发中,四视图中冠状视面、矢状面和横断面(显示过图像内部一点且平行于XY、YZ、XZ平面的平面),需要用到此类。
示例说明
CMakeLists.txt文件代码如下:
CMAKE_MINIMUM_REQUIRED(VERSION
2.8)
PROJECT(ImageResliceExample)
FIND_PACKAGE(VTK REQUIRED)
INCLUDE(
${VTK_USE_FILE})
ADD_EXECUTABLE(ImageResliceExample ImageResliceExample.cpp)
TARGET_LINK_LIBRARIES(ImageResliceExample
${VTK_LIBRARIES})
ImageResliceExample.cpp文件代码如下:
#include <vtkSmartPointer.h>
#include <vtkImageReader2.h>
#include <vtkMatrix4x4.h>
#include <vtkImageReslice.h>
#include <vtkLookupTable.h>
#include <vtkImageMapToColors.h>
#include <vtkImageActor.h>
#include <vtkRenderer.h>
#include <vtkRenderWindow.h>
#include <vtkRenderWindowInteractor.h>
#include <vtkInteractorStyleImage.h>
#include <vtkCommand.h>
#include <vtkImageData.h>
#include <vtkMetaImageReader.h>
#include <vtkImageCast.h>
class vtkImageInteractionCallback :
public vtkCommand
{
public:
static vtkImageInteractionCallback *New()
{
return new vtkImageInteractionCallback;
}
vtkImageInteractionCallback()
{
this->Slicing =
0;
this->ImageReslice =
0;
this->Interactor =
0;
}
void SetImageReslice(vtkImageReslice *reslice)
{
this->ImageReslice = reslice;
}
void SetImageMapToColors(vtkImageMapToColors *mapToColors)
{
this->mapToColors = mapToColors;
}
vtkImageReslice *GetImageReslice()
{
return this->ImageReslice;
}
void SetInteractor(vtkRenderWindowInteractor *interactor)
{
this->Interactor = interactor;
}
vtkRenderWindowInteractor *GetInteractor()
{
return this->Interactor;
}
virtual void Execute(vtkObject *,
unsigned long event,
void *)
{
vtkRenderWindowInteractor *interactor =
this->GetInteractor();
int lastPos[
2];
interactor->GetLastEventPosition(lastPos);
int currPos[
2];
interactor->GetEventPosition(currPos);
if (event == vtkCommand::LeftButtonPressEvent)
{
this->Slicing =
1;
}
else if (event == vtkCommand::LeftButtonReleaseEvent)
{
this->Slicing =
0;
}
else if (event == vtkCommand::MouseMoveEvent)
{
if (
this->Slicing)
{
vtkImageReslice *reslice =
this->ImageReslice;
int deltaY = lastPos[
1] - currPos[
1];
reslice->Update();
double sliceSpacing = reslice->GetOutput()->GetSpacing()[
2];
vtkMatrix4x4 *matrix = reslice->GetResliceAxes();
double point[
4];
double center[
4];
point[
0] =
0.0;
point[
1] =
0.0;
point[
2] = sliceSpacing * deltaY;
point[
3] =
1.0;
matrix->MultiplyPoint(point, center);
matrix->SetElement(
0,
3, center[
0]);
matrix->SetElement(
1,
3, center[
1]);
matrix->SetElement(
2,
3, center[
2]);
mapToColors->Update();
interactor->Render();
}
else
{
vtkInteractorStyle *style = vtkInteractorStyle::SafeDownCast(
interactor->GetInteractorStyle());
if (style)
{
style->OnMouseMove();
}
}
}
}
private:
int Slicing;
vtkImageReslice *ImageReslice;
vtkRenderWindowInteractor *Interactor;
vtkImageMapToColors *mapToColors;
};
int main()
{
vtkSmartPointer<vtkMetaImageReader> reader =
vtkSmartPointer<vtkMetaImageReader>::New();
reader->SetFileName (
"E:\\TestData\\brain.mhd" );
reader->Update();
int extent[
6];
double spacing[
3];
double origin[
3];
reader->GetOutput()->GetExtent(extent);
reader->GetOutput()->GetSpacing(spacing);
reader->GetOutput()->GetOrigin(origin);
double center[
3];
center[
0] = origin[
0] + spacing[
0] *
0.5 * (extent[
0] + extent[
1]);
center[
1] = origin[
1] + spacing[
1] *
0.5 * (extent[
2] + extent[
3]);
center[
2] = origin[
2] + spacing[
2] *
0.5 * (extent[
4] + extent[
5]);
static double axialElements[
16] = {
1,
0,
0,
0,
0,
1,
0,
0,
0,
0,
1,
0,
0,
0,
0,
1
};
vtkSmartPointer<vtkMatrix4x4> resliceAxes =
vtkSmartPointer<vtkMatrix4x4>::New();
resliceAxes->DeepCopy(axialElements);
resliceAxes->SetElement(
0,
3, center[
0]);
resliceAxes->SetElement(
1,
3, center[
1]);
resliceAxes->SetElement(
2,
3, center[
2]);
vtkSmartPointer<vtkImageReslice> reslice =
vtkSmartPointer<vtkImageReslice>::New();
reslice->SetInputConnection(reader->GetOutputPort());
reslice->SetOutputDimensionality(
2);
reslice->SetResliceAxes(resliceAxes);
reslice->SetInterpolationModeToLinear();
vtkSmartPointer<vtkLookupTable> colorTable =
vtkSmartPointer<vtkLookupTable>::New();
colorTable->SetRange(
0,
1000);
colorTable->SetValueRange(
0.0,
1.0);
colorTable->SetSaturationRange(
0.0,
0.0);
colorTable->SetRampToLinear();
colorTable->Build();
vtkSmartPointer<vtkImageMapToColors> colorMap =
vtkSmartPointer<vtkImageMapToColors>::New();
colorMap->SetLookupTable(colorTable);
colorMap->SetInputConnection(reslice->GetOutputPort());
colorMap->Update();
vtkSmartPointer<vtkImageActor> imgActor =
vtkSmartPointer<vtkImageActor>::New();
imgActor->SetInputData(colorMap->GetOutput());
vtkSmartPointer<vtkRenderer> renderer =
vtkSmartPointer<vtkRenderer>::New();
renderer->AddActor(imgActor);
renderer->SetBackground(
1,
1,
1);
vtkSmartPointer<vtkRenderWindow> renderWindow =
vtkSmartPointer<vtkRenderWindow>::New();
renderWindow->SetSize(
500,
500);
renderWindow->AddRenderer(renderer);
vtkSmartPointer<vtkRenderWindowInteractor> renderWindowInteractor =
vtkSmartPointer<vtkRenderWindowInteractor>::New();
vtkSmartPointer<vtkInteractorStyleImage> imagestyle =
vtkSmartPointer<vtkInteractorStyleImage>::New();
renderWindowInteractor->SetInteractorStyle(imagestyle);
renderWindowInteractor->SetRenderWindow(renderWindow);
renderWindowInteractor->Initialize();
vtkSmartPointer<vtkImageInteractionCallback> callback =
vtkSmartPointer<vtkImageInteractionCallback>::New();
callback->SetImageReslice(reslice);
callback->SetInteractor(renderWindowInteractor);
callback->SetImageMapToColors(colorMap);
imagestyle->AddObserver(vtkCommand::MouseMoveEvent, callback);
imagestyle->AddObserver(vtkCommand::LeftButtonPressEvent, callback);
imagestyle->AddObserver(vtkCommand::LeftButtonReleaseEvent, callback);
renderWindowInteractor->Start();
return EXIT_SUCCESS;
}
运行结果:
按下鼠标左键,移动鼠标时的gif图片:
代码解释:
先通过vtkMetaImageReader读取一副三维图像,获取图像范围、原点和像素间隔,由这三个参数可以计算图像的中心位置。接下来定义了切面的变换矩阵axialElements,该矩阵的前三列分别表示X、Y和Z方向矢量,第四列为切面坐标系原点。通过修改切面坐标系原点,可以得到不同位置的切面图像。然后将读取的图像作为vtkImageReslice的输入,通过函数SetResliceAxes()设置变换矩阵resliceAxis。
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